PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02354

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 222aa MW: 24310.6 Da PI: 8.0628

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02354	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	88	1.3e-27	4	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C++lr++C++dC+++p++ p++q++++ +++k++G++ +l+l++a+p r+++++sl+yeA+ r+ +P G++g+++++++ +q++++++l OIW02354 4 SCNGCRILRKGCSDDCTIRPCLewinsPESQANATLFLAKFYGRAGLLNLINAAPLPLRPAVFKSLMYEACGRIVNPAFGSLGLFWTGEWAQCQAAVDAVL 104 6***********************************************************************************************99988 PP DUF260 97 lkee 100 ++e OIW02354 105 NGSE 108 7765 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MRLSCNGCRI LRKGCSDDCT IRPCLEWINS PESQANATLF LAKFYGRAGL LNLINAAPLP 60 LRPAVFKSLM YEACGRIVNP AFGSLGLFWT GEWAQCQAAV DAVLNGSEIS AVDLSDWQVT 120 PGSKHVFPAH DIRHVSRDSH VDQLRGGKPR FKRTGNVIKP KARVGSFDSA RLWKPASASS 180 HGLRNKEGWE TESDQTVEAS LMSQDEPSRT AEANVDLELT LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68510.1	8e-59	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW02354