PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW02494
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 237aa    MW: 26992.8 Da    PI: 10.0136
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW02494genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.88.9e-162769547
              SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
    SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
              n+ + +vtfskR+ g++ K  E+S+LC+ae a+i+ s++g+ly
  OIW02494 27 NTNKFHVTFSKRKLGLFNKVTEISILCQAETALILSSQQGNLY 69
              566679************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MASSSKKNIA TTTIQHNKRK IEKLEPNTNK FHVTFSKRKL GLFNKVTEIS ILCQAETALI  60
LSSQQGNLYA CGYPGPDVVI RRFLTNGSPV QHSRTSKKEQ QEFVETLRLE FEAAHNKLKE  120
EKKRLDEIRE AHNGRLDLTP WWNQDIEKMG LEDLEHFITS LETLKLNLVA TAEAKKINPM  180
SHMVMTNAIG PSPRFSNSSL MNGYFTGNHQ AWNWMGSSSS SNLTVPKFQP GYYIRHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-23M-type_MADS family protein