PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02540

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 226aa MW: 25857.9 Da PI: 9.382

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02540	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.9	2.3e-27	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr gi+KKA+ELSvLCda+v +++fs tgklyey+s OIW02540 9 KKIDNLTARQVTFSKRRRGIFKKAQELSVLCDAKVGLLVFSATGKLYEYAS 59 68***********************************************86 PP
2	K-box	48.7	3.3e-17	93	170	21	98
K-box 21 lakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +a L ke+ + +R+++Ged e L+l eLqqLe++Le +lk++ ++K++l++++i lqk+ +l++e ++L++k+ OIW02540 93 HAELSKEVADKTQLLRRMKGEDFEGLNLDELQQLEKRLEAGLKRVIKTKEKLITDEIVALQKRGMKLEDESRQLKQKM 170 455666666666678*************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MVRQKIKIKK IDNLTARQVT FSKRRRGIFK KAQELSVLCD AKVGLLVFSA TGKLYEYASS 60 SMKDVLTRYN QHFHDINQRE RPLELQLENS INHAELSKEV ADKTQLLRRM KGEDFEGLNL 120 DELQQLEKRL EAGLKRVIKT KEKLITDEIV ALQKRGMKLE DESRQLKQKM SMMYKGKSPS 180 MVDKDIAIQE AVSLDSMNNV CSCNSCPSLD DDSSDISLKL GLSFPD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	4e-68	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIW02540