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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW02558 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | bHLH | ||||||||
| Protein Properties | Length: 340aa MW: 38150.1 Da PI: 6.6741 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 40.5 | 4.9e-13 | 130 | 181 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i A++++k+L+
OIW02558 130 QRMTHIAVERNRRKQMNEYLAVLRSLMPAS---YVQRSDQASIIGGAINFVKELE 181
79****************************...9******************995 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 340 aa Download sequence |
MALEAVVFPQ DSFNYGCNKD YLYSLIGEAS GGSYGFQRAE EERALLGIIN NNIEQGLHAN 60 WDSSPTVLQS NKEKWDSYSS PETATADQYL LGILPPPPSV EASVTTTTTT TRRKRRRTKS 120 AKNKEEIENQ RMTHIAVERN RRKQMNEYLA VLRSLMPASY VQRSDQASII GGAINFVKEL 180 EQTLQCMKGQ SQKKTKQQPL PENGFPCSSP FAEFFIFPQY STRATQGMNQ PTSDVMMTQN 240 QNQNQNQSCA MADIEVTLVD SHANIKILSK KQPRQLMKIV VGIQSLNLNI LHLNLTTVDD 300 MILTSVSVKV EERCQMNSVD EIASAVNQLL HTVQEETAFS |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 113 | 117 | RKRRR |
| 2 | 113 | 118 | RKRRRT |
| 3 | 131 | 142 | RMTHIAVERNRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G72210.1 | 9e-79 | bHLH family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW02558 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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