PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02728

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 264aa MW: 29829 Da PI: 5.2868

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02728	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60	5.2e-19	15	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed +l+++v+++G+g+W++I++ ++ gR++k+c++rw + OIW02728 15 KGSWSPQEDARLLKLVARHGPGNWSAISSSIP-GRSGKSCRLRWCNQ 60 799***************************.*********985 PP
2	Myb_DNA-binding	56.2	7.9e-18	69	111	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed +++da++++G++ W+tI+r ++ gRt++ +k++w++ OIW02728 69 PFTPAEDSIIIDAHALHGNR-WATISRLLP-GRTDNAIKNHWNST 111 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MMNSTSKFNS EDSVKGSWSP QEDARLLKLV ARHGPGNWSA ISSSIPGRSG KSCRLRWCNQ 60 LSPDVKHRPF TPAEDSIIID AHALHGNRWA TISRLLPGRT DNAIKNHWNS TLRRRRLAQG 120 TSSSDSDAAV IKKRTTNDFL LRSNIGLLDH NYPFKRPCRE RCSYENKDSG SGSGLGSEKI 180 TLENNNNSHV ITSLSLLPPG TAEEEEEEEE EEEEEEEEEE VEGREGNDEM VNEQSRMMEM 240 LRRMIADEVR NYVDSLGLHQ PLPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	8e-52	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW02728