PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02734

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 166aa MW: 18551.1 Da PI: 6.0842

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02734	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	142.3	1.5e-44	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +Ca+Ck+lrr+C+kdC++apyfp+++p+kfa+vhk+FGasnv+k+l+++p ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q+++l+ +la++++e OIW02734 6 PCASCKLLRRRCTKDCTFAPYFPSDDPQKFAIVHKVFGASNVSKMLQEIPVQQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAE 105 7**********************************************************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MGGNSPCASC KLLRRRCTKD CTFAPYFPSD DPQKFAIVHK VFGASNVSKM LQEIPVQQRA 60 DAVSSLVYEA NARVRDPVYG CVGAISYLQN QVSELQMQLA VAQAEILCIQ MQHDPVVMPT 120 PDIIDSDQKS YFLQNEFPQY LNFGSSTNVI HDSLKRENIF GHDMVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	8e-75	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW02734