PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03230

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 245aa MW: 26967.2 Da PI: 7.3193

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03230	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.7e-05	64	86	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++C+k F+++ L H++ H OIW03230 64 YACKYCDKKFTSSQALGGHQNAH 86 89******************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MEENKLKRKI DETLTLGYGS IPMVGETSPS KSSKLMTSNE LDSSLKSAEL SNDGDYKENP 60 SLDYACKYCD KKFTSSQALG GHQNAHKHER FLRKEKEKIM YGHEFGARFS TVTFPSMRNY 120 YQGSSSNLGH GVQLHDPMAQ MLSMPLPRYS TLGYDHFQGL NFSNTPLSGH QFGNNTSSYG 180 GGAIAPRFNL QGLKLFGGLN PISPTSNNYV AALENPSVTL AAIQAFNVSH DAPQALEEID 240 LTLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	5e-13	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW03230