PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW03313
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GATA
Protein Properties Length: 282aa    MW: 31711.8 Da    PI: 7.2251
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW03313genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.75.8e-17210244135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               C++C +  Tp+WR gp g+ktLCnaCG++y++ +l
  OIW03313 210 CTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRL 244
               *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDVCQNVSVS SECKQEQIHP PCSTSLDDLF SAQNMEVDVG LEWLSVFVED CFSSPPICLL  60
GPSGVQTTST SSNPSSTMKR PHHQNESFSL QNLAVHGKPR SKRKRLSAPI TNDPLRTSIW  120
SHKITSPQNE TPFCSDPPLL KQAYWLADSE LFVPKQKNDD EQEEVVKAKD EEVMMEKGIV  180
LSKESFGDSE QDADDVFSKN FQQHPMPRRC THCLSQRTPQ WRAGPLGPKT LCNACGVRYK  240
SGRLLPEYRP AKSPTFVNYL HSNSHKKVME MRGNGCSIFH SQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.15e-39GATA family protein