PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03374

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 437aa MW: 48391.4 Da PI: 9.2204

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03374	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5.1e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H OIW03374 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	14.5	0.0001	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k + +s++k H++t+ OIW03374 134 WVCERCSKGYAVQSDYKAHLKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MLVNNNLSSH PSSDPFSCSD NGTASSNKRR RRPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVKKRVFVC PEPSCLHHDP CHALGDLVGI 120 KKHFRRKHSN HKQWVCERCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACKMGSIRQE PQPLQGACFS RTASSPSPSS ETNFSTAPWP PPSLVIPKNP LVVIATQNRQ 240 TFLNPTTTTT TTIVASNAET SSKNNNNKLI YPNLDLQLST ATPTSINHVV AAPISLSSPK 300 NIDGNGLQLS IGSSEISDKS TESNNSTEGA HAREQAHEEL RIAMAEKAYA EEARKQAKAQ 360 IELAELEFTN AKRIRQQAQA ELNKAYSLKQ HAIKQINAAM LQITCHSCKQ QFQALSNEGG 420 QEEKNGNGKY LTKTSNS

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MLVNNNLSSH PSSDPFSCSD NGTASSNKRR RRPAGTPDPD AEVVSLSPKT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVKKRVFVC PEPSCLHHDP CHALGDLVGI  120
KKHFRRKHSN HKQWVCERCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACKMGSIRQE PQPLQGACFS RTASSPSPSS ETNFSTAPWP PPSLVIPKNP LVVIATQNRQ  240
TFLNPTTTTT TTIVASNAET SSKNNNNKLI YPNLDLQLST ATPTSINHVV AAPISLSSPK  300
NIDGNGLQLS IGSSEISDKS TESNNSTEGA HAREQAHEEL RIAMAEKAYA EEARKQAKAQ  360
IELAELEFTN AKRIRQQAQA ELNKAYSLKQ HAIKQINAAM LQITCHSCKQ QFQALSNEGG  420
QEEKNGNGKY LTKTSNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-142	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW03374