PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03376

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 237aa MW: 27856.8 Da PI: 8.4835

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03376	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	5.7e-17	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed++l ++v+ +G+++W++Ia+++ gR++k+c++rw++ OIW03376 4 RGHWRPAEDDKLRELVEHYGPHNWNAIAEKLR-GRSGKSCRLRWFNQ 49 899***************************.*********996 PP
2	Myb_DNA-binding	54.9	2.1e-17	56	100	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eE+e+l+ ++ +G++ W+ Iar ++ gRt++ +k++w+ OIW03376 56 RTPFTEEEEERLIASHRIHGNR-WAVIARVFP-GRTDNAVKNHWHVM 100 679*****************.*****.*********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MCSRGHWRPA EDDKLRELVE HYGPHNWNAI AEKLRGRSGK SCRLRWFNQL DPRINRTPFT 60 EEEEERLIAS HRIHGNRWAV IARVFPGRTD NAVKNHWHVM MARMRREKTK LYAKQHVHHH 120 HTNSSSNPKD NQQSNYEITS FPYSFVENFG YTCVKYNPFQ FPNKFHFQQP ASSSTILQDK 180 SQSVEFYDFL RVNTDQSNKS EVTDNTRRDE EEVNQDGVGQ ENKDGSPFID FLSVGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	1e-87	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW03376