PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03420

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 424aa MW: 45880.7 Da PI: 6.3802

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03420	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.1	4.2e-10	272	320	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq OIW03420 272 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 320 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MDFQHGNERI LKCPPSSGLS TNVSEMAISS VSMAKPNLPS DHVTNNPFLA SSAWDPLVSL 60 SQAQTFGGSS MVSHSDFGNN SSYPPLVLEN QGMSSTSHLV QYMSDSNLGD MVHKVPSYGS 120 GNFSEIVGTF GQPGFGDIAN TNSGYRSNYN VSKDAGTERA PINGEQSQVE DSATEEGTPG 180 SGPSGNRRKR SLDHNSSFSP NKNAEVDALK ISPGKSSESA KEHEKKQKVE QNNSADLRGK 240 QPVKQANENS QSGEAPKDTF IHVRARRGQA TNSHSLAERV RREKISERMR LLQELVPGCN 300 KITGKAVMLD EIINYVQSLQ KQVEFLSMKL ATVNPELTFD MERILSKDIL QSRIGHGIGG 360 YGPGISSSHP FPNESFQGTM TGMPSTSTQF PPLPQTVLDH EFQSFYGMGY DSSTALENLG 420 PNGT

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MDFQHGNERI LKCPPSSGLS TNVSEMAISS VSMAKPNLPS DHVTNNPFLA SSAWDPLVSL  60
SQAQTFGGSS MVSHSDFGNN SSYPPLVLEN QGMSSTSHLV QYMSDSNLGD MVHKVPSYGS  120
GNFSEIVGTF GQPGFGDIAN TNSGYRSNYN VSKDAGTERA PINGEQSQVE DSATEEGTPG  180
SGPSGNRRKR SLDHNSSFSP NKNAEVDALK ISPGKSSESA KEHEKKQKVE QNNSADLRGK  240
QPVKQANENS QSGEAPKDTF IHVRARRGQA TNSHSLAERV RREKISERMR LLQELVPGCN  300
KITGKAVMLD EIINYVQSLQ KQVEFLSMKL ATVNPELTFD MERILSKDIL QSRIGHGIGG  360
YGPGISSSHP FPNESFQGTM TGMPSTSTQF PPLPQTVLDH EFQSFYGMGY DSSTALENLG  420
PNGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	228	RRKRSLDHNSSFSPNKNAEVDALKISPGKSSESAKEHEKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-74	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW03420