PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03424

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 936aa MW: 103220 Da PI: 6.7169

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03424	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.4	6.4e-12	574	630	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g OIW03424 574 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 630 78*****************77776664346655.77****************98 PP
2	AP2	45.4	2e-14	673	724	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OIW03424 673 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 724 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 936 aa Download sequence
MDDSNSNCNN DDGNNDNWLG FSLSPYMKME PPHHHHNHHE HDDGQVQDHN LYYHHSQQGS 60 AVSNSTVPTS FYWENSAFHS LPLSMMPLKS DGSLCIIEAL NKSQTQVMMP SSSPKLEDFL 120 GGATMGSDQY GDSEREAMAL SLDSIYYNQN AHESQTSRDF LSDPFRQHPY YSGLACNSIY 180 QTPLDEEQET KQPHVTVCSS SQMPQVGDEG TACFKNWEQQ VNNSTTSIGD GVIASGSPSG 240 SVGVVGRVSS AQHCGNLQSL SLSMSHVSQS NCVTVPSGTT PTESVVMETK KRGSSKLGQK 300 HTVHRKSIDT FGQRTSQYRG VTSTVPTSFY WENSAFHSLP LSMMPLKSDG SLCIIEALNK 360 SQTQVMMPSS SPKLEDFLGG ATMGSDQYGD SEREAMALSL DSIYYNQNAH ESQTSRDFLS 420 DPFRQHPYYS GLACNSIYQT PLDEEQETKQ PHVTVCSSSQ MPQVGDEGTA CFKNWEQQVN 480 NSTTSIGDGV IASGSPSGSV GVVGRVSSAQ HCGNLQSLSL SMSHVSQSNC VTVPSGTTPT 540 ESVVMETKKR GSSKLGQKHT VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCKKE 600 GQTRKGRQGG YDMEEKAARA YDLAALKYWG SSTHINFPLQ NYQMQLEEMK NMSRQEFVAH 660 LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDVAAI 720 KFRGVNAVTN FDISRYHVEN IMASNTLLTG EQARRNNKDS EPRTETIKYN VVSSQISNKE 780 ELEAANNNNE TNGSDWNMVL YHQSPQQQQQ KQQSDSNSSD HKAMNCGNYR NPAFSMALHG 840 LIGTDSVGSS NQTMLDHDST IKVGTHFSNQ SSLVTNLSSP RECSPDKTGP TLLFPNPPIG 900 STKIVSPIAT TSVSSWFPSR AISMSHLPVF AAWNDA

Sequence ? help Back to Top

Protein Sequence Length: 936 aa Download sequence

MDDSNSNCNN DDGNNDNWLG FSLSPYMKME PPHHHHNHHE HDDGQVQDHN LYYHHSQQGS  60
AVSNSTVPTS FYWENSAFHS LPLSMMPLKS DGSLCIIEAL NKSQTQVMMP SSSPKLEDFL  120
GGATMGSDQY GDSEREAMAL SLDSIYYNQN AHESQTSRDF LSDPFRQHPY YSGLACNSIY  180
QTPLDEEQET KQPHVTVCSS SQMPQVGDEG TACFKNWEQQ VNNSTTSIGD GVIASGSPSG  240
SVGVVGRVSS AQHCGNLQSL SLSMSHVSQS NCVTVPSGTT PTESVVMETK KRGSSKLGQK  300
HTVHRKSIDT FGQRTSQYRG VTSTVPTSFY WENSAFHSLP LSMMPLKSDG SLCIIEALNK  360
SQTQVMMPSS SPKLEDFLGG ATMGSDQYGD SEREAMALSL DSIYYNQNAH ESQTSRDFLS  420
DPFRQHPYYS GLACNSIYQT PLDEEQETKQ PHVTVCSSSQ MPQVGDEGTA CFKNWEQQVN  480
NSTTSIGDGV IASGSPSGSV GVVGRVSSAQ HCGNLQSLSL SMSHVSQSNC VTVPSGTTPT  540
ESVVMETKKR GSSKLGQKHT VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCKKE  600
GQTRKGRQGG YDMEEKAARA YDLAALKYWG SSTHINFPLQ NYQMQLEEMK NMSRQEFVAH  660
LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDVAAI  720
KFRGVNAVTN FDISRYHVEN IMASNTLLTG EQARRNNKDS EPRTETIKYN VVSSQISNKE  780
ELEAANNNNE TNGSDWNMVL YHQSPQQQQQ KQQSDSNSSD HKAMNCGNYR NPAFSMALHG  840
LIGTDSVGSS NQTMLDHDST IKVGTHFSNQ SSLVTNLSSP RECSPDKTGP TLLFPNPPIG  900
STKIVSPIAT TSVSSWFPSR AISMSHLPVF AAWNDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-123	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW03424