PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03534

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 416aa MW: 46102.7 Da PI: 9.7716

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03534	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	7e-05	179	201	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg++F+ ++L+ H+ + H OIW03534 179 ACSQCGEVFPKMESLELHQAVrH 201 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MALLTFLPEQ SDPKKKQQLP KRKHKQKQQQ NPQQQKQKQK EKENEKQPSS WDQIKNLITC 60 KQIEGSRVHD PSKVGYSMLG SSCSSICSFR DVHGNTRVVH RADNSSPESS TLGQENGLLN 120 RKPLTPGPSS TRSGKSIGGT TYTSSTRGIH QFRKLSGCYE CHMIIDPKRL PIPRSTVCAC 180 SQCGEVFPKM ESLELHQAVR HAVSELGPED SGRNIVEIIF KSSWLRKDNT ICKIERILKV 240 HNTQRTIQRF EDCRDTVKTR ALNSTKKNPR CAADGNELLR FHCTTLTCAL GSRGSSALCS 300 AVPGCGVCTI IRHGFRGGDG SKGVKTTASS GRAHDSVQFG VENRRAMLVC RVIAGRVKRV 360 EKDVPLLTEE ENVSVVGSYD SVAGYTGIYS NLEELLVFNS RAILPCFVVI YKVLPC

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MALLTFLPEQ SDPKKKQQLP KRKHKQKQQQ NPQQQKQKQK EKENEKQPSS WDQIKNLITC  60
KQIEGSRVHD PSKVGYSMLG SSCSSICSFR DVHGNTRVVH RADNSSPESS TLGQENGLLN  120
RKPLTPGPSS TRSGKSIGGT TYTSSTRGIH QFRKLSGCYE CHMIIDPKRL PIPRSTVCAC  180
SQCGEVFPKM ESLELHQAVR HAVSELGPED SGRNIVEIIF KSSWLRKDNT ICKIERILKV  240
HNTQRTIQRF EDCRDTVKTR ALNSTKKNPR CAADGNELLR FHCTTLTCAL GSRGSSALCS  300
AVPGCGVCTI IRHGFRGGDG SKGVKTTASS GRAHDSVQFG VENRRAMLVC RVIAGRVKRV  360
EKDVPLLTEE ENVSVVGSYD SVAGYTGIYS NLEELLVFNS RAILPCFVVI YKVLPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-161	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW03534