PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW03644
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LBD
Protein Properties Length: 205aa    MW: 22196.3 Da    PI: 9.8678
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW03644genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26094.31.3e-294107199
    DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 
               +C++C+vlr++C++dC+++p +     p++q++++ +++k++G++ +l+ll+a++++ r+++++sl+yeA+ r+ +Pv+G++g++++++++l+q+++e++l
  OIW03644   4 SCNGCRVLRKGCTPDCPIRPSLhwiksPHSQSNATVFLAKFYGRAGLLNLLTAAEPHLRPAIFKSLLYEACGRIVNPVSGSTGLLTTGTWHLCQAAVEAVL 104
               6*************************************************************************************************998 PP

    DUF260  97 lke 99 
                ++
  OIW03644 105 SGA 107
               766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MRLSCNGCRV LRKGCTPDCP IRPSLHWIKS PHSQSNATVF LAKFYGRAGL LNLLTAAEPH  60
LRPAIFKSLL YEACGRIVNP VSGSTGLLTT GTWHLCQAAV EAVLSGAPIQ KNSSDTSFDQ  120
ACDIRHVGKG VKSRASEKLH EVKSDKSKFK KRSVNPKRNT DSTISELDRD SGSGVSENRS  180
VGGSDSGFVE SVELELTLGW GPMKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67100.12e-56LBD family protein