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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW03769 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 334aa MW: 37953.5 Da PI: 6.4513 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 56.7 | 5.5e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl
OIW03769 14 RGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61
788*******************************************97 PP
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| 2 | Myb_DNA-binding | 47.5 | 4e-15 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
rg+++++E l+++++ lG++ W+ Ia++++ gRt++++k++w+
OIW03769 67 RGSFSAQEAALIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109
899*******************.*********.***********8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 334 aa Download sequence |
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SAQEAALIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLFSHD 120 VVPSLSTFSG NSFVESFFPL STENPILNYH HHHNHLDQLY LPILQGNFDH NDIKLDINNY 180 NTNFLHIQNP MPQTVPSNNP PLLCEDTWSL GTVPHHLNPY QDIQITKSDA TNQSTWQHYE 240 SVEPNINVPK VCDSIEDYVC NIPYNPSTSK EQHETLARIQ CYAPSICSQD DETLDATNQV 300 EYIDALIMSS LQSTTTSSSS IVTNSIIPSS LEYS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G13890.2 | 3e-80 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW03769 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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