PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03905

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 388aa MW: 43119.2 Da PI: 7.5284

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03905	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.9	9.5e-07	239	261	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H OIW03905 239 HHCQVCGKGFKRDANLRMHMRAH 261 68*******************99 PP
2	zf-C2H2	10.8	0.0015	328	351	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + OIW03905 328 YVCKRCNqKQFSVLSDLRTHEKHC 351 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MISRATSSFN HQGFQMFPLT EDLVSPNVEV DNSDGGSGSS SSHSSSLLFY LSVLKDKLSQ 60 VQTLVGVILS PDQSLPESTS MAISSMNSTI HEIIVTATSM MLTSQQMMDP PGTTTTTNDC 120 TNDLHHQQIA QSNFGNNDKG VLSNIAPNNE NIRCQGFFPS TESEALDWFG QSYNNNSMNN 180 INNCNLKNEV AISENNNVSQ GDHGNDESYN INRGPNNSST KNYDVIELDA DDLLAKYTHH 240 CQVCGKGFKR DANLRMHMRA HGDEYKTSDA LKNSLKNSGT SLGNVKPIKY SCPQEGCRWN 300 QKHVKFQPLK SMICAKNHYK RTHCPKMYVC KRCNQKQFSV LSDLRTHEKH CGDLKWQCSC 360 GTTFSRKDKL MGHVTLFVGH QPATNIGL

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MISRATSSFN HQGFQMFPLT EDLVSPNVEV DNSDGGSGSS SSHSSSLLFY LSVLKDKLSQ  60
VQTLVGVILS PDQSLPESTS MAISSMNSTI HEIIVTATSM MLTSQQMMDP PGTTTTTNDC  120
TNDLHHQQIA QSNFGNNDKG VLSNIAPNNE NIRCQGFFPS TESEALDWFG QSYNNNSMNN  180
INNCNLKNEV AISENNNVSQ GDHGNDESYN INRGPNNSST KNYDVIELDA DDLLAKYTHH  240
CQVCGKGFKR DANLRMHMRA HGDEYKTSDA LKNSLKNSGT SLGNVKPIKY SCPQEGCRWN  300
QKHVKFQPLK SMICAKNHYK RTHCPKMYVC KRCNQKQFSV LSDLRTHEKH CGDLKWQCSC  360
GTTFSRKDKL MGHVTLFVGH QPATNIGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	3e-98	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW03905