PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03934

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 463aa MW: 52415.2 Da PI: 8.9159

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03934	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.4	5.2e-05	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H OIW03934 61 FICEICKKGFQRDQNLQLHRRGH 83 89*******************88 PP
2	zf-C2H2	12	0.00066	138	160	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + OIW03934 138 WKCNKCSKKYAVQSDWKAHSKIC 160 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MMPEELFSLP SNMRNTLDIQ LHHPNSSPIS NPTSNQAKKK RNPDAEVIAL SPKSLVATNR 60 FICEICKKGF QRDQNLQLHR RGHNLPWKLK QRNKQEVIKK KVYVCPEKSC VHHDPCRALG 120 DLTGIKKHFS RKHGEKKWKC NKCSKKYAVQ SDWKAHSKIC GTKEYKCECG TMFSRRDSFI 180 THRAFCGALA EQSARITTSV PAVFNFRNDH LINTQAPRNH LSLHGFHQEF DVSGPEPLME 240 NFMDAERGQK LGLPLWLDQA NSNANEVVQT MNRNMFGSSQ QAQFLNYRYP EPEASFTSGN 300 LLSLPGAMSQ GLKQKQEENK VNLSHSFSSL HSSDQNLQGV PTHISTRIND NTTFNSSNNL 360 FGLNSNIVEM QTILKHGNQQ GGNFNNMVVS SLNDTNNCSS FGNLDHIVMP VDEEQLGLTR 420 DFLGVGDETL RTPFLHQDLD KFNPIESVLN LQSQFGGHHN MMK

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MMPEELFSLP SNMRNTLDIQ LHHPNSSPIS NPTSNQAKKK RNPDAEVIAL SPKSLVATNR  60
FICEICKKGF QRDQNLQLHR RGHNLPWKLK QRNKQEVIKK KVYVCPEKSC VHHDPCRALG  120
DLTGIKKHFS RKHGEKKWKC NKCSKKYAVQ SDWKAHSKIC GTKEYKCECG TMFSRRDSFI  180
THRAFCGALA EQSARITTSV PAVFNFRNDH LINTQAPRNH LSLHGFHQEF DVSGPEPLME  240
NFMDAERGQK LGLPLWLDQA NSNANEVVQT MNRNMFGSSQ QAQFLNYRYP EPEASFTSGN  300
LLSLPGAMSQ GLKQKQEENK VNLSHSFSSL HSSDQNLQGV PTHISTRIND NTTFNSSNNL  360
FGLNSNIVEM QTILKHGNQQ GGNFNNMVVS SLNDTNNCSS FGNLDHIVMP VDEEQLGLTR  420
DFLGVGDETL RTPFLHQDLD KFNPIESVLN LQSQFGGHHN MMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	7e-91	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW03934