PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03959

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 165aa MW: 18819 Da PI: 10.1886

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03959	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00045	46	68	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+++Fs+ L H +H OIW03959 46 FKCKTCNRRFSSFQALGGHRASH 68 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MKRVREIEEG DIEMNNCLML ITKVGEISNI NQKKDEKELL TKDGDFKCKT CNRRFSSFQA 60 LGGHRASHKK QKLMVNNLSC NHNHESIKST MKPKMHPCPI CGVKFGIGQA LGGHMRKHRG 120 AINHGLVIHK HDNLWFKKSK EMSLNLCLDL NLGPPENDIK LRTHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59820.1	9e-32	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW03959