PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW04068
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LBD
Protein Properties Length: 223aa    MW: 24905.6 Da    PI: 5.4214
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW04068genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260114.47.2e-367106199
    DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
               +C aCk+lrrkC++dCv++p+f  ++ + +f +vhk++Gasnv++ll++lp + r+da+ ++ y+A ar++dP+yG+v++i +lqqq+++l++e++ l +
  OIW04068   7 SCGACKFLRRKCTSDCVFSPHFSYDEaTTHFSAVHKVYGASNVSRLLSHLPIQFRSDAAITISYQAMARMQDPIYGCVAHIYALQQQVANLQEEINILAS 106
               6**********************98868*******************************************************************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MTGFGSSCGA CKFLRRKCTS DCVFSPHFSY DEATTHFSAV HKVYGASNVS RLLSHLPIQF  60
RSDAAITISY QAMARMQDPI YGCVAHIYAL QQQVANLQEE INILASNLTM ENSTVGVLNC  120
GSDQTPVNSN NEIHYILQND ANREQYYQNQ LSNLLSNHEG SSATSYHQSF DSMMNIELSN  180
AHGLEDSSLF GDSNSNPLEK FLSGIDQEVF MNHPWFKHNA EMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.17e-53LBD family protein