PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04110

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 249aa MW: 28277.8 Da PI: 9.3872

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04110	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.4e-18	15	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT++Ede l+++v+q+G+++W+ I++ + gR+ k+c++rw + OIW04110 15 KGSWTPQEDETLLRLVAQHGPRNWTVISAGIS-GRSSKSCRLRWCNQ 60 799***************************.*********985 PP
2	Myb_DNA-binding	53	8.2e-17	69	111	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed ++++a++++G++ W+tI+r ++ gRt++ +k++w++ OIW04110 69 SFTPAEDSIIINAHALYGNK-WATISRLLP-GRTDNAIKNHWNST 111 69****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MMNSTAIFNG VDRVKGSWTP QEDETLLRLV AQHGPRNWTV ISAGISGRSS KSCRLRWCNQ 60 LSPDVQHRSF TPAEDSIIIN AHALYGNKWA TISRLLPGRT DNAIKNHWNS TLRRHGLAQG 120 YSSSESDIVV NKKRVTNDFL IRSYPSKRPY RENHFPENKK GLGSGFAENI HSIPVTTPLS 180 LWPPGAAEKE EEEEEESDEV EGKGEKVNGQ THLREIIRRM IADEVKSYMD DLRHRHIHTG 240 LKLHQSLPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	5e-53	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW04110