PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04112

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 178aa MW: 20043.7 Da PI: 6.9914

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04112	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	125.7	2.3e-39	11	110	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+l+r+C ++C++apyf +++ kkfa vhk+FGasnv+k+l ++pee+red+++sl+yeAear++dPvyG++g i lq+++ +l+++la +k++ OIW04112 11 SCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEHREDTVNSLAYEAEARLKDPVYGCIGAIALLQRKMVELQHDLAIAKDR 110 6*********************************************************************************************999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MRGYEPRSSS SCAACKFLKR RCIPNCIFAP YFRSDECKKF AKVHKVFGAS NVSKILIEVP 60 EEHREDTVNS LAYEAEARLK DPVYGCIGAI ALLQRKMVEL QHDLAIAKDR LALYAAANTT 120 TTTTPSNDFF NNHVSLPPLP DFYTCSDFND SFSNSSPSQS LSRHETTVDD FIQIPYIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11090.1	2e-65	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW04112