PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04114

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 116aa MW: 13091.9 Da PI: 4.5887

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04114	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	58.7	1.7e-18	1	55	46	100
DUF260 46 lkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +++lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q+++l+ +la++++e OIW04114 1 MQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAE 55 6899***********************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 116 aa Download sequence
MQELPVHQRA DAVSSLVYEA NARVRDPVYG CVGAISYLQN QVSELQMQLA VAQAEILCIQ 60 MQHEPIVMPN QEIMDLDHKS YLLHNELPQF LNFGSSSNVI HDSLKIENIF GHDMVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	2e-42	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW04114