PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04171

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 224aa MW: 24631.7 Da PI: 8.8927

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04171	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	25	45	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk F++ L +H + H OIW04171 25 CEFCGKEFKSGKALGVHKKIH 45 ******************998 PP
2	zf-C2H2	15.6	4.5e-05	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C C+k F++ +L H+rtH OIW04171 77 SCYVCNKDFPSEKSLCGHMRTH 98 7********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MMTRSPCEVG DEDEIVQKGG AIQNCEFCGK EFKSGKALGV HKKIHFEAHR NLKSKKGNCN 60 GKKFSSLMPS NRKLRLSCYV CNKDFPSEKS LCGHMRTHPN RDWRGVHPPG TTADASNKHT 120 PCFSDSKVQI DDDNYVGAIA AATASSDASR CLTLSWKKTN KRSGRSVFYA EVVAAAKTLV 180 SFTSMSRSCE AIEGIDTQVS SSNSYARSSC FSQFDLNEPP YNHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56200.1	2e-14	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW04171