PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04175

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

NF-YC

Protein Properties

Length: 262aa MW: 29271.4 Da PI: 4.496

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04175	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	40.4	6.6e-13	1	69	30	98
NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 ++adedv +i+ +P l+ska elf+ +l r++ + + +t++ ++++v+ ++fdfl div + OIW04175 1 MQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYDITVRKGAKTMNAFHLKQCVQTFNVFDFLKDIVSK 69 899***************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MQADEDVGKI AMAVPLLVSK ALELFLQDLC DRTYDITVRK GAKTMNAFHL KQCVQTFNVF 60 DFLKDIVSKV PDLGGSAAPG DDRAVTKRRK VAEDGDNDSD EEQKKSKMPE PGHTSGRGRG 120 RGRGRGRGRG SRTADQEMAS HVKVEDDSDM LHQNDKHTRS NESLENVPDP EEVKQSFAVS 180 KPAETCIRNF DLNMEPDENM DSLDVPTPVP SSSPVKSMSE EKHEEYPGWS LSDMEKIAID 240 PIQLANLNRN VDEDMEDYDE EM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	126	RGRGRGRGRG
2	117	127	RGRGRGRGRGR
3	119	128	RGRGRGRGRG
4	119	129	RGRGRGRGRGR
5	121	130	RGRGRGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12480.1	3e-50	NF-YC family protein

Link Out ? help Back to Top
Ensembl	OIW04175