PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04459

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 237aa MW: 26856.6 Da PI: 9.5136

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04459	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.7	2.3e-06	93	112	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp+C k F+r nL+ H+ OIW04459 93 FSCPICLKAFNRYNNLQMHM 112 89*****************9 PP
2	zf-C2H2	13	0.00031	177	199	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgks k + ++H +++ OIW04459 177 FTCRKCGKSLAVKGDWRTHEKNC 199 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MNQNQLQPLP LLSSFLGSSS SPQEEVLLQN QKPRTCYSEA HEDVTVALHI GLPDNSSSVS 60 NTNNNEVVNS SGQVPNNYWI PTQEQILIGF SHFSCPICLK AFNRYNNLQM HMWGHGSQYR 120 RGPDSLKRTH PRPLLDIPCY CCSSGCKNSI EHPKAKPLKD FRTLQTHYKR KHGIKPFTCR 180 KCGKSLAVKG DWRTHEKNCG KRWLCICGSD FKHKRSLKDH IKAFGFGHSP FSSSDAM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	129	DSLKRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34790.1	3e-96	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW04459