PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW04540
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 241aa    MW: 27320.1 Da    PI: 9.4164
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW04540genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF56.92.6e-182268248
              ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
    SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
              ++e + +r+vtf+kR+ g++ K  ELS+LC+ae avi+ s++gkly+
  OIW04540 22 KVEPNNKRHVTFTKRKLGLFNKVTELSILCQAETAVILSSQQGKLYT 68
              5677889***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MSSSSNDTIT TKCNKRKIEI KKVEPNNKRH VTFTKRKLGL FNKVTELSIL CQAETAVILS  60
SQQGKLYTCG YPDPDAVIRR FLTDGSPVQR GRAGKKQQQE LVETLRLEYE DTHKMLQEEK  120
KKLDEIKEAH NGRLDFPAWW NKDIEKMGVE DLENFMASLE ILKLNLVATA EGMKLNSRTP  180
MIPTPIDPRA MFSNTTATDP RAMFSNFNGC FSGNHQAWNS MNGSSSSSRN PLVTKFDLGH  240
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-22M-type_MADS family protein