PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04562

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 396aa MW: 45005.8 Da PI: 6.0274

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04562	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.4	2.7e-13	197	248	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a++ A++++k+L+ OIW04562 197 QRMTHIAVERNRRRQMNDHLSVLRSLMPSS---YIQRGDQASTIGGAIDFVKELE 248 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MERFQEPGPL NSCFTGDHFE VNSLEQQRLV DAESFRFVEN EEQFLISSLE DNMPFLQMLQ 60 SVESSPQFFP LKEPSFRTLL SLQHMKKQQP WENIAYIPRM DTQIQAAMEL ESCVTHDILE 120 MQSPVKSESN NELHQQHTPS AASCVVEKVM SYDECNHAII ANANTQSSCH KTQIATRERR 180 KRKRTRPTKS IEDVENQRMT HIAVERNRRR QMNDHLSVLR SLMPSSYIQR GDQASTIGGA 240 IDFVKELEQL LQSLEAQKMV RKNEEVGNGN NNNNNSNGSS SIELCKPPAS FLSSEEAKFG 300 DEVRTEMKSN LGHIEVTLIQ THVNLKIECQ RKHGQLIKVI VALEDLRLTI LHLNITSTVT 360 SVLYSLNLKI EEDCKLGSAN DIADAVHQIL SFINGS

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MERFQEPGPL NSCFTGDHFE VNSLEQQRLV DAESFRFVEN EEQFLISSLE DNMPFLQMLQ  60
SVESSPQFFP LKEPSFRTLL SLQHMKKQQP WENIAYIPRM DTQIQAAMEL ESCVTHDILE  120
MQSPVKSESN NELHQQHTPS AASCVVEKVM SYDECNHAII ANANTQSSCH KTQIATRERR  180
KRKRTRPTKS IEDVENQRMT HIAVERNRRR QMNDHLSVLR SLMPSSYIQR GDQASTIGGA  240
IDFVKELEQL LQSLEAQKMV RKNEEVGNGN NNNNNSNGSS SIELCKPPAS FLSSEEAKFG  300
DEVRTEMKSN LGHIEVTLIQ THVNLKIECQ RKHGQLIKVI VALEDLRLTI LHLNITSTVT  360
SVLYSLNLKI EEDCKLGSAN DIADAVHQIL SFINGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	184	RRKRKR
2	198	209	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	1e-72	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW04562