PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04653

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

RAV

Protein Properties

Length: 394aa MW: 43124.6 Da PI: 9.7409

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04653	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.1	3e-15	74	122	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV + +grW A+I++ ++r++lg+f t+eeAaka++ a+++++g OIW04653 74 SKYKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNTEEEAAKAYDTAAQRFRG 122 89**9888.8*****3.....5**********************998 PP
2	B3	100.3	1.1e-31	213	313	1	93
EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+ tpsdv+k++rlv+pk++ae+h g++ +++ l +ed g++W+++++y+++s++yvltkGW++Fvk+++Lk+gD+v F+ + +++++ OIW04653 213 FEKAVTPSDVGKLNRLVIPKQHAEKHfplqngvnGIVAGKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDKNLKAGDTVFFHKSTGPDKQMY 313 89***************************99999999*************************************************95443665555 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDGGSCNDES TATDSLSITI SPTTTLLTFT ALSKKVLPLP LSNNLCRAGS GVSVIVDSDS 60 GSGVEAESRK LPSSKYKGVV PQPNGRWGAQ IYEKHQRVWL GTFNTEEEAA KAYDTAAQRF 120 RGKDAVTNFK PPSSSVVVDG GNNDDTEAEF LSSHSKSEIV DMLRKHTYND ELEQSKRNRG 180 FNDRSLSRST SANNGVDCYF SGASGNKARE QLFEKAVTPS DVGKLNRLVI PKQHAEKHFP 240 LQNGVNGIVA GKGVLLNFED VGGKVWRFRY SYWNSSQSYV LTKGWSRFVK DKNLKAGDTV 300 FFHKSTGPDK QMYIDWKVKN VVNEVRIVGS VGPIVEPVQM FRLFGVNILK LPGSDSNGNI 360 NSASSIGGCS NGKRREMGMF TLECSKKPKI IATL

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDGGSCNDES TATDSLSITI SPTTTLLTFT ALSKKVLPLP LSNNLCRAGS GVSVIVDSDS  60
GSGVEAESRK LPSSKYKGVV PQPNGRWGAQ IYEKHQRVWL GTFNTEEEAA KAYDTAAQRF  120
RGKDAVTNFK PPSSSVVVDG GNNDDTEAEF LSSHSKSEIV DMLRKHTYND ELEQSKRNRG  180
FNDRSLSRST SANNGVDCYF SGASGNKARE QLFEKAVTPS DVGKLNRLVI PKQHAEKHFP  240
LQNGVNGIVA GKGVLLNFED VGGKVWRFRY SYWNSSQSYV LTKGWSRFVK DKNLKAGDTV  300
FFHKSTGPDK QMYIDWKVKN VVNEVRIVGS VGPIVEPVQM FRLFGVNILK LPGSDSNGNI  360
NSASSIGGCS NGKRREMGMF TLECSKKPKI IATL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13260.1	1e-124	RAV family protein

Link Out ? help Back to Top
Ensembl	OIW04653