PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04714

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 502aa MW: 55932.3 Da PI: 8.9875

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04714	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00046	446	468	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C++ F++ L H r+H OIW04714 446 HECPICNRIFKSGQALGGHKRSH 468 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MEERKFVCKY CSKRFPCGKS LGGHIRIHMN EHSVQANEER NNAAMLKFDA MRKKKRDSLG 60 YGDGDDGDGA DGNLTYGLRE NPKKTMRFVH SNGTNNVQQQ LDKFCKECGK GFPSLKALCG 120 HMACHSEKEK QKLVLDSESD TETNSAPRRS KRMRFKDNSN NNNNNNHLSS SLANGSSPVS 180 EVEQEQEEVA RCLMMLSKDT RYYSGRFGLF AESSDNNSIV VEAKSPSPNT KFTIKNGKNS 240 VPNAYEFVDK KLQNGKKLKS AEIGSDYDNS DSGYFSYGPK KIDSADSNGG FFRTQVQSSK 300 VVDMAGFEDY DVELSKEFSR GRSISTEFKK LVHEDLENGR EDGATMRSDS KKRLIYDSLG 360 SKNVANGFNN DEMYKHGRKG LKYESLNTEI QNVYEDDSAY ESDENSSDSD SYTAAKSHKI 420 KALNGKKSSK GKNKKKKLKS KKIKEHECPI CNRIFKSGQA LGGHKRSHFV GGSEENTLVI 480 RPAGAAPAPC LIDLNLPAPV DE

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MEERKFVCKY CSKRFPCGKS LGGHIRIHMN EHSVQANEER NNAAMLKFDA MRKKKRDSLG  60
YGDGDDGDGA DGNLTYGLRE NPKKTMRFVH SNGTNNVQQQ LDKFCKECGK GFPSLKALCG  120
HMACHSEKEK QKLVLDSESD TETNSAPRRS KRMRFKDNSN NNNNNNHLSS SLANGSSPVS  180
EVEQEQEEVA RCLMMLSKDT RYYSGRFGLF AESSDNNSIV VEAKSPSPNT KFTIKNGKNS  240
VPNAYEFVDK KLQNGKKLKS AEIGSDYDNS DSGYFSYGPK KIDSADSNGG FFRTQVQSSK  300
VVDMAGFEDY DVELSKEFSR GRSISTEFKK LVHEDLENGR EDGATMRSDS KKRLIYDSLG  360
SKNVANGFNN DEMYKHGRKG LKYESLNTEI QNVYEDDSAY ESDENSSDSD SYTAAKSHKI  420
KALNGKKSSK GKNKKKKLKS KKIKEHECPI CNRIFKSGQA LGGHKRSHFV GGSEENTLVI  480
RPAGAAPAPC LIDLNLPAPV DE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	1e-82	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW04714