PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW04788
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 106aa    MW: 12083 Da    PI: 10.5256
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW04788genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.46.2e-31959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              krien + rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s
  OIW04788  9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSQRGKLYEFAS 59
              79***********************************************86 PP
2K-box48.53.7e-17591033478
     K-box  34 eqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqie 78 
               + R+llGe+L+s+s+ eLq++e+qLe+s++++R++K  ++++ ie
  OIW04788  59 SSRKLLGEGLGSCSIDELQEIEKQLERSVSNVRARKVSVIKNPIE 103
               56***************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MVRGKTQLKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIVFSQ RGKLYEFASS  60
RKLLGEGLGS CSIDELQEIE KQLERSVSNV RARKVSVIKN PIEFYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.18e-49MIKC_MADS family protein