PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04958

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 220aa MW: 24603.4 Da PI: 8.9951

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04958	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H OIW04958 61 FSCNYCQRKFYSSQALGGHQNAH 83 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MEDQKHSHDS TPHLVLDLSL SSKDSSDESK PELNLFNSFH TNLSENHSEV SHYNEIEPRT 60 FSCNYCQRKF YSSQALGGHQ NAHKRERTMV RRGYKTDAAA ISVDFGHGYS SMAYQPSHGL 120 YNKSLGIQVH SMIHKPYNQI PFFGWKRQIL DSQPAIVEFT SGKFHVGAET GSSLVGGIPR 180 LGKFSNSVVT EGFGGLFGST SHLKSKQNKL QQNLDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	2e-35	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW04958