PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05079

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 482aa MW: 53588.6 Da PI: 8.3761

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05079	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.9	5.6e-16	277	323	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn Er+RRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq OIW05079 277 VHNLSERKRRDRINEKMKSLQELIPRC-----NKSDKASMLDEAIEYLKSLQ 323 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MELLWQNGQV VMQSQNHRHI RKPTHPPPAR ISGTSIRPEV LNQNLFMQED EMTSWLHHCP 60 IDYDDNQNFC ADLLYLPPPT PPVNVNHQSS NNNNSGMQTV AQNSQLTELR QSQKPAAPRP 120 PIPPPRRTEQ AVRANTPNFA YFSKQKTKTE LGPSSSSMNA AKESTMVDSC DTPFLAAVSR 180 FSEPTEGDGF GGRSMSATTT SGGGGKETTT FGMTSSPGGS SSSGEMDREL RAEDRKRKGR 240 VEAEEWESRN EDVDFESAEG KKKVRGSSTK RSRAAEVHNL SERKRRDRIN EKMKSLQELI 300 PRCNKSDKAS MLDEAIEYLK SLQLQVQMMS MGCGMVPMMF AGMQPYMPAM GMGMGMGLGM 360 EMGMNRQVMP FPNMLAGSAM PSTTPHLGPR FPMPPFHMQH VPAPDSSRMQ AMNQTNNNMP 420 NSVAMPVPNQ SCMPNMTDPY QQYLAPHQMQ FQLMQNQAMN QLNVSKPSTS RGPEKPENHQ 480 SG

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MELLWQNGQV VMQSQNHRHI RKPTHPPPAR ISGTSIRPEV LNQNLFMQED EMTSWLHHCP  60
IDYDDNQNFC ADLLYLPPPT PPVNVNHQSS NNNNSGMQTV AQNSQLTELR QSQKPAAPRP  120
PIPPPRRTEQ AVRANTPNFA YFSKQKTKTE LGPSSSSMNA AKESTMVDSC DTPFLAAVSR  180
FSEPTEGDGF GGRSMSATTT SGGGGKETTT FGMTSSPGGS SSSGEMDREL RAEDRKRKGR  240
VEAEEWESRN EDVDFESAEG KKKVRGSSTK RSRAAEVHNL SERKRRDRIN EKMKSLQELI  300
PRCNKSDKAS MLDEAIEYLK SLQLQVQMMS MGCGMVPMMF AGMQPYMPAM GMGMGMGLGM  360
EMGMNRQVMP FPNMLAGSAM PSTTPHLGPR FPMPPFHMQH VPAPDSSRMQ AMNQTNNNMP  420
NSVAMPVPNQ SCMPNMTDPY QQYLAPHQMQ FQLMQNQAMN QLNVSKPSTS RGPEKPENHQ  480
SG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	235	263	RKRKGRVEAEEWESRNEDVDFESAEGKKK
2	282	287	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.1	2e-37	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW05079