PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05124

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 468aa MW: 53746.6 Da PI: 6.9957

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05124	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	76.3	4.7e-24	110	214	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyf 82 +Wt+ +v++Li a+ +++++ ++++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ + OIW05124 110 KWTDAMVRLLIMAVYYIGDEAGTSEgttthdstgkkkvsglmlQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQNLM 210 7***************9999987788899999999**************************************************559999999999 PP trihelix 83 dqle 86 d ++ OIW05124 211 DTMD 214 9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MEPNGLSSGM FPSISTGLLG VENPSKQQQQ QQNLQNQHNP HHLHHHSQIV SYVSNHDTDT 60 NPQQSLKHGY NPFSAKTNNN NNNKPQSTNM SDEDDSSSDK RKVSPWHRMK WTDAMVRLLI 120 MAVYYIGDEA GTSEGTTTHD STGKKKVSGL MLQKKGKWKS VSRAMMEKGF YVSPQQCEDK 180 FNDLNKRYKR VNDILGKGTA CRVVENQNLM DTMDLSPKLK EEVRKLLNSK HLFFREMCAY 240 HNSCGHGSNN NNTGSNSTLQ QSAEVISVTE PSQSQPEQQQ QQQCFHSSEN GVGNMRILKG 300 RNGVELEDDS DESDESGEYS EEEEDESNEV GSRGQVDHED ETEVRKRIKK GGLYVPSSTI 360 QNLSSELNGV VHDGGKSVWE KKVWMKKRMM QLEEQKVSYE VESFELEKQR LRWVRYSSKK 420 ERGMERDKLE NERKRLENER MVLIIRQMEV ELMNVQKQKQ QQQQHSST

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MEPNGLSSGM FPSISTGLLG VENPSKQQQQ QQNLQNQHNP HHLHHHSQIV SYVSNHDTDT  60
NPQQSLKHGY NPFSAKTNNN NNNKPQSTNM SDEDDSSSDK RKVSPWHRMK WTDAMVRLLI  120
MAVYYIGDEA GTSEGTTTHD STGKKKVSGL MLQKKGKWKS VSRAMMEKGF YVSPQQCEDK  180
FNDLNKRYKR VNDILGKGTA CRVVENQNLM DTMDLSPKLK EEVRKLLNSK HLFFREMCAY  240
HNSCGHGSNN NNTGSNSTLQ QSAEVISVTE PSQSQPEQQQ QQQCFHSSEN GVGNMRILKG  300
RNGVELEDDS DESDESGEYS EEEEDESNEV GSRGQVDHED ETEVRKRIKK GGLYVPSSTI  360
QNLSSELNGV VHDGGKSVWE KKVWMKKRMM QLEEQKVSYE VESFELEKQR LRWVRYSSKK  420
ERGMERDKLE NERKRLENER MVLIIRQMEV ELMNVQKQKQ QQQQHSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	2e-63	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW05124