PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05379

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 512aa MW: 56689.8 Da PI: 8.7332

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05379	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4.1e-05	24	46	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C C+k F r nL+ H r H OIW05379 24 FICDVCNKGFQREQNLQLHRRGH 46 89*******************88 PP
2	zf-C2H2	12.7	0.00038	100	122	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ OIW05379 100 WKCEKCSKKYAVQSDWKAHSKTC 122 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MVTTDPDAEV IALSPKTLMA TNRFICDVCN KGFQREQNLQ LHRRGHNLPW KLKQKSTKEQ 60 KRKVYMCPEP TCVHHDPSRA LGDLTGIKKH YSRKHGEKKW KCEKCSKKYA VQSDWKAHSK 120 TCGTREYRCD CGTLFSRRDS FITHRAFCDT LAHETAKHHT NLNPLGTHLF GTTNQMSLNL 180 YQVGAQISNL QNQNHATTNN SILSHGNAAL APPKYEHIFS SPLHHHSSYG VVQSPHSMSN 240 SSAGFFMTDP NQGFQEFQSH QQGTISSHKE LYGLMQLPDF QGNTNNNNST SESVSVPANM 300 FNINFFTNSN NSSGNIMAGQ FNNINGEGNQ ETTLYINNKS PVSNQVGSGN LSSLFGNSFV 360 QQETMSPHIS ATALLQKAAQ MSSTTNASSM LRGLGRSSTN GAESFGSDSR REGIRSSMEN 420 DQHHHLHGLT NSIGNGNNSI YGNMKGNENN LGQFHNVEEP NKLSQNLGVC FGESDKLTLD 480 FLGVGGIVRN MNSRFSQREQ QHSMGSTSSL DP

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MVTTDPDAEV IALSPKTLMA TNRFICDVCN KGFQREQNLQ LHRRGHNLPW KLKQKSTKEQ  60
KRKVYMCPEP TCVHHDPSRA LGDLTGIKKH YSRKHGEKKW KCEKCSKKYA VQSDWKAHSK  120
TCGTREYRCD CGTLFSRRDS FITHRAFCDT LAHETAKHHT NLNPLGTHLF GTTNQMSLNL  180
YQVGAQISNL QNQNHATTNN SILSHGNAAL APPKYEHIFS SPLHHHSSYG VVQSPHSMSN  240
SSAGFFMTDP NQGFQEFQSH QQGTISSHKE LYGLMQLPDF QGNTNNNNST SESVSVPANM  300
FNINFFTNSN NSSGNIMAGQ FNNINGEGNQ ETTLYINNKS PVSNQVGSGN LSSLFGNSFV  360
QQETMSPHIS ATALLQKAAQ MSSTTNASSM LRGLGRSSTN GAESFGSDSR REGIRSSMEN  420
DQHHHLHGLT NSIGNGNNSI YGNMKGNENN LGQFHNVEEP NKLSQNLGVC FGESDKLTLD  480
FLGVGGIVRN MNSRFSQREQ QHSMGSTSSL DP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-96	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW05379