PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05380

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 514aa MW: 56614.3 Da PI: 9.0654

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05380	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.4	2.6e-05	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H OIW05380 53 FICEVCNKGFQREQNLQLHRRGH 75 89*******************88 PP
2	zf-C2H2	12.7	0.00038	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ OIW05380 129 WKCEKCSKKYAVQSDWKAHSKTC 151 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MAASSSAASL LGIREVDQNQ MNQQQSSTPS SSTTPAAPPQ KKRRNQHGTP CKFICEVCNK 60 GFQREQNLQL HRRGHNLPWK LKQKSTKEQK RKVYMCPEPT CVHHDPSRAL GDLTGIKKHY 120 SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYRCDC GTLFSRRDSF ITHRAFCDAL 180 AHESARQQPN LNSAIGSQLY GNSSMTLAIS QVGSINDQNN HQSGDQLCLR PTTAGQFDHI 240 LQQSLGSSTF KPLETMHSSP FFMPDEPNQN QNYQNKALFQ GLLQLADLNN NHNNNPFCNI 300 NSKNNLSEHI NNDQGSNFFS IMSDHNQTST TTNAPSLFSS SVQHSSGSIS HMSATALLQK 360 AAQMGASSSN NNNTASSILR SFRSTTSNSD QRPLSSANFD TIFSGNNNNL QELMNSFVVS 420 GNSPILENGS SSSSAARFST GFEAYDNNSI NREPKLHSVS IGGSDKLSTR DFLGVGQIVR 480 SMSGGVSHRE QQQQQQNTAP SDQSFGDGGN FLSE

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MAASSSAASL LGIREVDQNQ MNQQQSSTPS SSTTPAAPPQ KKRRNQHGTP CKFICEVCNK  60
GFQREQNLQL HRRGHNLPWK LKQKSTKEQK RKVYMCPEPT CVHHDPSRAL GDLTGIKKHY  120
SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYRCDC GTLFSRRDSF ITHRAFCDAL  180
AHESARQQPN LNSAIGSQLY GNSSMTLAIS QVGSINDQNN HQSGDQLCLR PTTAGQFDHI  240
LQQSLGSSTF KPLETMHSSP FFMPDEPNQN QNYQNKALFQ GLLQLADLNN NHNNNPFCNI  300
NSKNNLSEHI NNDQGSNFFS IMSDHNQTST TTNAPSLFSS SVQHSSGSIS HMSATALLQK  360
AAQMGASSSN NNNTASSILR SFRSTTSNSD QRPLSSANFD TIFSGNNNNL QELMNSFVVS  420
GNSPILENGS SSSSAARFST GFEAYDNNSI NREPKLHSVS IGGSDKLSTR DFLGVGQIVR  480
SMSGGVSHRE QQQQQQNTAP SDQSFGDGGN FLSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	9e-84	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW05380