PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW05427
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 246aa    MW: 27879.7 Da    PI: 10.2146
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW05427genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.83.5e-29959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              krienk+ +qvtfskRr+g+lKKA+E+SvLCd++va+i+fs++gkl+eyss
  OIW05427  9 KRIENKTSQQVTFSKRRTGLLKKAHEISVLCDTQVALIMFSTKGKLFEYSS 59
              79***********************************************96 PP
2K-box87.72.3e-2981169997
     K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
               ++++ +e+++ ++ kL ++ e L+r++R++ G dL++L+lkeLq+Le+qL+++lk+iR++Kn++l ++i+e+qk+ + lqe+n +L k+
  OIW05427  81 ANNESQENWSFDYFKLTAKAEVLERNIRNFAGYDLDPLNLKELQNLEHQLDTALKRIRTRKNQVLNQSISEMQKRTRTLQEQNSMLAKM 169
               5677789*******************************************************************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGRGRVQLKR IENKTSQQVT FSKRRTGLLK KAHEISVLCD TQVALIMFST KGKLFEYSSE  60
PSVENVLERY ERHAHTIHAG ANNESQENWS FDYFKLTAKA EVLERNIRNF AGYDLDPLNL  120
KELQNLEHQL DTALKRIRTR KNQVLNQSIS EMQKRTRTLQ EQNSMLAKMK EKEKTLTENS  180
QPETLGQSSS PFNLSSQKQL LRQRQVPCLT LSGTLQARAS PEEAVGAQTA AAGGGNTLIP  240
PWMLHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.11e-74MIKC_MADS family protein