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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW05446 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | YABBY | ||||||||
| Protein Properties | Length: 217aa MW: 24488.8 Da PI: 7.6085 | ||||||||
| Description | YABBY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | YABBY | 233.3 | 5.6e-72 | 11 | 179 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102
d+ seq+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhCt+ll vn++ + + hl++s+ + ++ l+ e n + n+ ++++++ ++ ++
OIW05446 11 DHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSSNQFHLGHSYFSPSHNLLQEEMPNPTPNYFMNQNTNIANEFSMPA 111
577899****************************************999999999999999*****99999999999888888887777776666665667 PP
YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
+ + +e+pr+ ++rPPekrqrvPsaynrfik+eiqrika nPdi+hreafsaaaknWahfP+ihfgl
OIW05446 112 RTTVDELPRPLIINRPPEKRQRVPSAYNRFIKDEIQRIKAVNPDITHREAFSAAAKNWAHFPHIHFGL 179
888999***999******************************************************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 217 aa Download sequence |
MSSSSTTLSL DHLPPSEQLC YVHCNICDTV LAVSVPCTSL FKTVTVRCGH CTNLLPVNMR 60 GLLLPSSNQF HLGHSYFSPS HNLLQEEMPN PTPNYFMNQN TNIANEFSMP ARTTVDELPR 120 PLIINRPPEK RQRVPSAYNR FIKDEIQRIK AVNPDITHRE AFSAAAKNWA HFPHIHFGLM 180 PTDQTVKKTN VHQQQDGEEV LIKEGFYASA NVGFSPY |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G45190.1 | 2e-84 | YABBY family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW05446 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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