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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW05647 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 269aa MW: 30143.9 Da PI: 8.3299 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 53.6 | 5e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl
OIW05647 14 KGAWTKEEDDRLISYIHAHGEGSWRSLPKAAGLLRCGKSCRLRWINYL 61
79******************************99************97 PP
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| 2 | Myb_DNA-binding | 54.1 | 3.5e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++T++Edel+++++ +lG++ W++Ia ++ gRt++++k++w+++
OIW05647 67 RGNFTQDEDELIIKLHSLLGNK-WSLIAGRLA-GRTDNEIKNYWNTH 111
89********************.*********.************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 269 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDDRLISYIH AHGEGSWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TQDEDELIIK LHSLLGNKWS LIAGRLAGRT DNEIKNYWNT HIRRKLLNRG 120 IDPATHRPLN DADNHVQDQE VQASVAATNT ISFASSASAA IVKQEQDTSI TSKSSMFGVV 180 GENNSEVGKG ILLERCPDLN LELTISPPRL NEPDESFKNI ERSLCFGCSL GLQNSNHCNC 240 GNRNNSTATS YDFLGLKTGV WDYRRLEMK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G38620.1 | 1e-95 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW05647 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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