PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05797

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 429aa MW: 48290.8 Da PI: 8.2209

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05797	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H OIW05797 6 FICEICNKGFQREQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	11.1	0.0012	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C++ + +s+ k H + + OIW05797 83 WKCEKCSRKYAVQSDWKAHNKIC 105 58*****************8876 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MATNRFICEI CNKGFQREQN LQLHRRGHNL PWKLKQRENN DQVRKKVYVC PEKSCVHHDP 60 CRALGDLTGI KKHYSRKHGE KKWKCEKCSR KYAVQSDWKA HNKICGTREY KCDCGTLFSR 120 KDSFITHRAF CDALTEESVR VPGALSNLRR DIHLINNSTT QVPRIPQIFP RFHSGLDGNS 180 VSEPLEFNYA NNSQLQCFPR KLSAFSSNVN SVACNNMPDL VETMNMFGSP PQQETQWLMN 240 YRASFTSANN NNLSIPLPAQ LPHGLKQEQE ENKQDLSYIT ANSVYFNNQN SQGGGGGPTH 300 MSAAISLLHK DNASSTFDNN NHNVFGMIGF SGKVNNNNTV EVQKFFKEGN LNHDQLVSLE 360 DGSTNLGASG FSMNDSSSNN NKDQFGLTRD FLGVGDESIT ISRPFDLTEF NAIGSVMDLQ 420 SSHYGGHYC

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MATNRFICEI CNKGFQREQN LQLHRRGHNL PWKLKQRENN DQVRKKVYVC PEKSCVHHDP  60
CRALGDLTGI KKHYSRKHGE KKWKCEKCSR KYAVQSDWKA HNKICGTREY KCDCGTLFSR  120
KDSFITHRAF CDALTEESVR VPGALSNLRR DIHLINNSTT QVPRIPQIFP RFHSGLDGNS  180
VSEPLEFNYA NNSQLQCFPR KLSAFSSNVN SVACNNMPDL VETMNMFGSP PQQETQWLMN  240
YRASFTSANN NNLSIPLPAQ LPHGLKQEQE ENKQDLSYIT ANSVYFNNQN SQGGGGGPTH  300
MSAAISLLHK DNASSTFDNN NHNVFGMIGF SGKVNNNNTV EVQKFFKEGN LNHDQLVSLE  360
DGSTNLGASG FSMNDSSSNN NKDQFGLTRD FLGVGDESIT ISRPFDLTEF NAIGSVMDLQ  420
SSHYGGHYC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	46	KLKQRENNDQVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	6e-92	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW05797