 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | OIW05823 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
| Family | MYB | ||||||||
| Protein Properties | Length: 325aa MW: 36759.9 Da PI: 5.7075 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 52.2 | 1.4e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd +l++++ ++G+g +W + +++ g++R++k+c++rw++yl
OIW05823 14 RGPWSPEEDSKLKEYIDKHGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62
89*********************************************97 PP
| |||||||
| 2 | Myb_DNA-binding | 37.4 | 6.1e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g ++ eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++
OIW05823 69 GEFSDEEDRIICSLYVNIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
789******************.*********.***********97 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 325 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDSKLKEYID KHGTGGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDEEDRIIC SLYVNIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGL 120 LPLSHQRKPP FPSSSHDQNP SPSPSMYSDY NCSTSYYIPQ TLSFTDLEPI SLPSTNFATT 180 SCTTTSLSLP FYQSQDSTMV TTSAISPMQC YYPMFGSEGS CSSSDGSCTQ IKQEEQGYQS 240 YMSTSFDEFN NKTMFSYNIN GRGGNINQWD EKSSGCFGQT QTPLENYYDL EDIKQMISSG 300 SSSFINIDEN KSEENCMYYY PDECN |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G57620.1 | 2e-73 | MYB family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | OIW05823 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|