PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05831

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 312aa MW: 34389.2 Da PI: 6.3592

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05831	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00072	142	164	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H OIW05831 142 YECKTCNRTFPSFQALGGHRASH 164 99**********99999998887 PP
2	zf-C2H2	13.2	0.00027	231	253	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H OIW05831 231 HECSICGSEFTSGQALGGHMRRH 253 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MEKGQGLGTE EQLVIMAKGK RTKRLRLLSP NCGVAGATYT HSSANSEDSS STTTYESTDQ 60 QDQDLANCLI LLARGGPDSN HHDHQKQDDH DDDDDNNNKI EKDDYDDEDG NIEKGGKSTT 120 STGKLVEMST STNTNKGGVY IYECKTCNRT FPSFQALGGH RASHKRPKLM LIEEKKPSQL 180 QLQPQPQPPV IMNYDHFKEA GQAHIKPDLS ISIQLESHTH KAFHVNKAKI HECSICGSEF 240 TSGQALGGHM RRHRATNNTT QVVAAPVPAL QVEVQHPKNL LEFDLNLPAP EEDLPETKFV 300 LSASPALVGC HY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	3e-43	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW05831