PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05866

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 305aa MW: 34855.7 Da PI: 8.6368

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05866	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	153	172	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ OIW05866 153 FACNICSKTFNRYNNMQMHM 172 78*****************9 PP
2	zf-C2H2	16.3	2.9e-05	237	259	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F k + ++H +++ OIW05866 237 FMCRKCGKTFAVKGDWRTHEKNC 259 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MGLRECNNIG ENKNLYLHAP TFIEWLKPYN SSPSYLIPTE SSSTSSPSSS VTQNEFVHET 60 IQFLPILNGK PLKEEELKKE SFEVKEEKVE QMSVALHIGL PNTITDAECS DEKKVFHVKE 120 EEESVKKTSL NGSSERRFWI PTPAQILVGP IQFACNICSK TFNRYNNMQM HMWGHGSEYR 180 KGPDSLKGTQ PAEMLGLPCY CCAQGCKNNI NHLRAKPLKD FRTLQTHYKR KHGTKPFMCR 240 KCGKTFAVKG DWRTHEKNCG KFWYCTCGSD FKHKRSLKDH IRSFGKGHNP RPNSLEELDC 300 ITGSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-104	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW05866