PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW05916
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MYB
Protein Properties Length: 243aa    MW: 28176.5 Da    PI: 6.3712
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW05916genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.18.5e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+ eEde+l d+v+++G  +W++ ++  g+ R++k+c++rw++yl
         OIW05916 14 KGAWSREEDERLRDYVQRYGHSNWRKLPKLAGLARCGKSCRLRWLNYL 61
                     79********************************************97 PP
2Myb_DNA-binding49.97.2e-1668112248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g  T+ E+e + + +++lG++ W++Ia++++ gRt++++k++w+++l
         OIW05916  68 GDYTQKEEEMIMKFHQELGNK-WSLIAEKLP-GRTDNEIKNHWHSHL 112
                      5689*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MVRAPFYDKS GVKKGAWSRE EDERLRDYVQ RYGHSNWRKL PKLAGLARCG KSCRLRWLNY  60
LKPNLKHGDY TQKEEEMIMK FHQELGNKWS LIAEKLPGRT DNEIKNHWHS HLKKCLKSND  120
ITTSDLNSKP GHDPLDGKTT HQFEKSESLD ANEGADLYHI LESSSPMSPQ PCYINEAHNY  180
SLTSNVAEST MNCNTSKEDI VDQWVTFEEF GSGFWTEPFI VEHTYTDNEI LCDEGLAFFV  240
PHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.16e-56MYB family protein