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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW05917 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 325aa MW: 37103.1 Da PI: 5.3688 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 51.3 | 2.8e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEd +l+ +v+++G+ +W+ ++ g+ R++k+c++rw++yl
OIW05917 14 KGTWTQEEDRKLIAYVTKYGSWNWRQLPKFAGLQRCGKSCRLRWLNYL 61
799*******************************************97 PP
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| 2 | Myb_DNA-binding | 60.5 | 3.5e-19 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++T+eE+e++++++++lG++ W+tIa ++ gRt++++k++w++
OIW05917 67 RGNFTQEEEEIIIRLHNKLGNR-WSTIATHLS-GRTDNEIKNHWHT 110
89********************.*********.***********97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 325 aa Download sequence |
MVRTPSFDKS GLKKGTWTQE EDRKLIAYVT KYGSWNWRQL PKFAGLQRCG KSCRLRWLNY 60 LRPNVRRGNF TQEEEEIIIR LHNKLGNRWS TIATHLSGRT DNEIKNHWHT SLKKSFQQNT 120 VIKEKDKASF KPKHTEFNPG SSYSVSNNVA LQVTPPSTTS QISDSTTGSL SSISSEFSSS 180 ISWDDTSSTA KLVIEDDFPF LDDAFWIESD LADISNIHSE IIQGDYYNDV FQSLDTIDML 240 DALSPHPSSN KNIVMESDVG SFVYVDTEVT MNHLWTQSFV SDTCHVPSQL ITPFEAESQY 300 FSQAYGSESD FWSQNNLCDQ HLSLF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G02940.1 | 7e-54 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW05917 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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