PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05958

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 458aa MW: 50835.1 Da PI: 6.6523

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05958	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.1	5e-06	349	387	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L OIW05958 349 VRKEKMGDRITALQQLVAPF-----GKTDTASVLSEAIEYIKFL 387 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MADDNQFQGS GNWWESSRNM RFESGDQSQS SSSGLTNIGN FCWQQQQHDM VVDHMKPRSS 60 SSMEGTTSVQ VFHDKLQQQQ QDSCATNSTN DHNNLHMMGL GLSSQAMDWN QASLLRGEKA 120 SESSFRSMLQ ENLSSSNTNF QHETGIGLSQ QVQWRPEPSS TNEFKQVNRG FSLDQTQFSP 180 QYSSGDSNVT SQGIPSTFHT DHYPSVLQGL LGPESNQQGS FENIRPMSFP YSPSYGLNSN 240 ELIPSWPGSK VPQFLRASPP KQPPIPNSNQ LHFTNNAPFW NASEAPIKDA RPSFFPSLQQ 300 PFSTPSFDVQ SKNISEVRDS GAVMKKSGSE PPPKRPRNET PSPLPAFKVR KEKMGDRITA 360 LQQLVAPFGK TDTASVLSEA IEYIKFLHEQ VTVLSTPYMK SGAPTLHQQN SGNSKEGEGP 420 KQDLRSRGLC LVPVSSTFPV THEPTVDFWT PTFGGTYR

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MADDNQFQGS GNWWESSRNM RFESGDQSQS SSSGLTNIGN FCWQQQQHDM VVDHMKPRSS  60
SSMEGTTSVQ VFHDKLQQQQ QDSCATNSTN DHNNLHMMGL GLSSQAMDWN QASLLRGEKA  120
SESSFRSMLQ ENLSSSNTNF QHETGIGLSQ QVQWRPEPSS TNEFKQVNRG FSLDQTQFSP  180
QYSSGDSNVT SQGIPSTFHT DHYPSVLQGL LGPESNQQGS FENIRPMSFP YSPSYGLNSN  240
ELIPSWPGSK VPQFLRASPP KQPPIPNSNQ LHFTNNAPFW NASEAPIKDA RPSFFPSLQQ  300
PFSTPSFDVQ SKNISEVRDS GAVMKKSGSE PPPKRPRNET PSPLPAFKVR KEKMGDRITA  360
LQQLVAPFGK TDTASVLSEA IEYIKFLHEQ VTVLSTPYMK SGAPTLHQQN SGNSKEGEGP  420
KQDLRSRGLC LVPVSSTFPV THEPTVDFWT PTFGGTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	6e-85	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW05958