PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05997

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 441aa MW: 48300.1 Da PI: 8.2207

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05997	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	8.7e-05	42	62	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk F r nL+ H r H OIW05997 42 CETCGKGFQRDQNLQLHRRGH 62 *******************88 PP
2	zf-C2H2	11.5	0.00094	146	164	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H + OIW05997 146 DCGTVFSRRDSFITHRAFC 164 8**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MLENMDDGEV SNGFPQNLIT DPEAEVIALS PKTLMATNRF LCETCGKGFQ RDQNLQLHRR 60 GHNLPWKLKQ RTSTEIRKRV YVCPEKTCVH HNPSRALGDL TGIKKHFCRK HGEKKWKCDK 120 CSKCYAVQSD RKAHSKTCGT REYKCDCGTV FSRRDSFITH RAFCDALAEE TARVNATSNI 180 SNTLGDNISY NIMGAHLGPN METHFSSIFK PVSTTDHETS NQTCTGLSLW MDQLSHQAHE 240 TMVNGNIHQL GSTPRSGSAI YGNPFSQCTN NPPPSNNYHL NWVFETKPSS NSNQELIAST 300 TTSLPLGNII KDATCTSQLL SVPSLYSTQH QSHQTSSATN MSATALLQKA AQIGATSTID 360 PSFLGNLGLK YSNSLGQDGN KLCLMYGSSS VLTSVGSEAE KSACDLSQMH PAKRRQVQNE 420 EGIGGGQTRD FLGVGEGKGA N

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MLENMDDGEV SNGFPQNLIT DPEAEVIALS PKTLMATNRF LCETCGKGFQ RDQNLQLHRR  60
GHNLPWKLKQ RTSTEIRKRV YVCPEKTCVH HNPSRALGDL TGIKKHFCRK HGEKKWKCDK  120
CSKCYAVQSD RKAHSKTCGT REYKCDCGTV FSRRDSFITH RAFCDALAEE TARVNATSNI  180
SNTLGDNISY NIMGAHLGPN METHFSSIFK PVSTTDHETS NQTCTGLSLW MDQLSHQAHE  240
TMVNGNIHQL GSTPRSGSAI YGNPFSQCTN NPPPSNNYHL NWVFETKPSS NSNQELIAST  300
TTSLPLGNII KDATCTSQLL SVPSLYSTQH QSHQTSSATN MSATALLQKA AQIGATSTID  360
PSFLGNLGLK YSNSLGQDGN KLCLMYGSSS VLTSVGSEAE KSACDLSQMH PAKRRQVQNE  420
EGIGGGQTRD FLGVGEGKGA N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.2	1e-128	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW05997