PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06200

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 340aa MW: 38575.5 Da PI: 7.5129

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06200	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.9	2e-06	179	198	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r nL+ H+ OIW06200 179 FSCHVCSKTFNRYNNLQMHM 198 89*****************9 PP
2	zf-C2H2	10.9	0.0015	263	285	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C +Cgk F k + ++H +++ OIW06200 263 YTCIKCGKAFAVKGDWRTHEKNC 285 8999***************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MTDPNSKLFD GWFNFMPLQP YDAHDQSNYF FSSSSLYPLV YSSNNRFEIQ SEASPSNNIA 60 CPPSPPLIEA LPLINKLSLT KQHHQNIEPS NRNSVSEEDK YLENLFTGTE YDGTADTVSL 120 NIGLPRMDTS SSDLGSRKVS TCVEKERVNM ISAHPFDGLN KGQYWIPTPS QILIGPTQFS 180 CHVCSKTFNR YNNLQMHMWG HGSQYRKGSD SLKGTQPTAM LRLPCFCCAP DCKHNIDHPR 240 AKPLKDFRTL QTHYKRKHGV KPYTCIKCGK AFAVKGDWRT HEKNCGKIWY CLCGSDFKHK 300 RSLKDHIKAF GFGHGVFGMD CMQEDDEPAS EIEHDEESSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-115	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW06200