PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06205

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 320aa MW: 36008 Da PI: 6.8791

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06205	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	52.6	7.7e-17	183	237	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq + Lee F++++ ++ +++ LAk+l+L rqV vWFqNrRa+ k OIW06205 183 RKKLRLSKEQSNFLEESFKEHNILNPKQKLGLAKQLHLRPRQVEVWFQNRRARTK 237 778899***********************************************98 PP
2	HD-ZIP_I/II	124.3	5.6e-40	183	272	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+++LEesF+e++ L+p++K la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++lkeen+rL+ke +eLr +l OIW06205 183 RKKLRLSKEQSNFLEESFKEHNILNPKQKLGLAKQLHLRPRQVEVWFQNRRARTKLKQTEVDCEYLKKCCETLKEENRRLHKELQELR-TL 272 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MELDLSLGDS SRSCVFMEKS HEASNQFGFG FNTTTLSIGQ VTTKQSDQHQ HEETTKEKHK 60 HNSHLEDQEA ANEYHISTSH KADNNTSLLQ LDFLSHTPFV APINALPLQS FPWNPPPFEN 120 AVGSCPRGLD MNMLPVAVAV AVEDEAEEVA GLSSSSPNST TSSFQRGSSS RASDEDESGG 180 STRKKLRLSK EQSNFLEESF KEHNILNPKQ KLGLAKQLHL RPRQVEVWFQ NRRARTKLKQ 240 TEVDCEYLKK CCETLKEENR RLHKELQELR TLKTSNTFSM HLPATTLTMC PSCENVSTNS 300 NSTTNNEPTT SKFQHGKPRF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	182	188	TRKKLRL
2	232	240	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	9e-65	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW06205