PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW06239
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 61aa    MW: 6982.2 Da    PI: 10.724
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW06239genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.51e-29959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              +rienk+ rqvtfskRr g++KKA+ELS LCdaeva+iifs +gkly yss
  OIW06239  9 ERIENKISRQVTFSKRRSGLMKKAFELSLLCDAEVALIIFSGRGKLYQYSS 59
              69***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    
MGRGRVILER IENKISRQVT FSKRRSGLMK KAFELSLLCD AEVALIIFSG RGKLYQYSST  60
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.37e-30MIKC_MADS family protein