PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06349

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 685aa MW: 76121.9 Da PI: 8.3799

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06349	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.7e-05	76	97	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C++ F ++ n++rHir+H OIW06349 76 KCEKCSQEFCSPINYRRHIRVH 97 8********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MAVAKLKASG TQNVMKIEDK IDTIISQVVG IEPFLSFPRA RDSHVQWIHL LHALNQQEHP 60 GWPLLSPIPV KVQLLKCEKC SQEFCSPINY RRHIRVHHRL KNLAKDHTTN RDLLAAYWDK 120 LSVEKAKEVV SFNNVMLEEV PGSSVLNALT ILVQRQVFSS FPQSYVRAGA TLLDIVKSNS 180 SIFPISSQDL FSILDDASEK TCLCGTTVSM QRYVFGGEAG KNGLEPRNLV ACTSFLLEQK 240 LVNAWLADKD AEALRCQKQL VEEEEAAQKR QAEILERKRH KKLRQKEHKV REQRHGDKAK 300 TKQNIDSTVE DLAPAESSLD TCAFEAHNPD TSVDNAPSHV PSQFHGTNEG IVGDTQSGYD 360 LGTDQNIVRQ SAHGHNHRTI HAKRQGMLKP QWTIANGLHA SQNSPISNPD TIQKYGTKHD 420 QSTAAIFNCS EVWSQKPTRE VDMVVSKAIV EKEIDQCKNP EVLIGSIPVT LGHCSQLEGN 480 AVAFREDVVV ENLVKENSSQ DKPMKPDFDQ NGNNHPTLKF WRPLGRHDNK NPLAVNRGGP 540 EADAVYVNED SQNLSGPSSL RSCSIDGSDI CSENNSPHPE GRVEPGSLLL SSHAARDFLA 600 QRWKEALSLD HVKLVISPIS EPPRRQKTRD SKVVVGQYSD AVKSNVHANA ESRLPATSGV 660 TKSKPRAKPE KGTKTKYIPK QKTTT

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MAVAKLKASG TQNVMKIEDK IDTIISQVVG IEPFLSFPRA RDSHVQWIHL LHALNQQEHP  60
GWPLLSPIPV KVQLLKCEKC SQEFCSPINY RRHIRVHHRL KNLAKDHTTN RDLLAAYWDK  120
LSVEKAKEVV SFNNVMLEEV PGSSVLNALT ILVQRQVFSS FPQSYVRAGA TLLDIVKSNS  180
SIFPISSQDL FSILDDASEK TCLCGTTVSM QRYVFGGEAG KNGLEPRNLV ACTSFLLEQK  240
LVNAWLADKD AEALRCQKQL VEEEEAAQKR QAEILERKRH KKLRQKEHKV REQRHGDKAK  300
TKQNIDSTVE DLAPAESSLD TCAFEAHNPD TSVDNAPSHV PSQFHGTNEG IVGDTQSGYD  360
LGTDQNIVRQ SAHGHNHRTI HAKRQGMLKP QWTIANGLHA SQNSPISNPD TIQKYGTKHD  420
QSTAAIFNCS EVWSQKPTRE VDMVVSKAIV EKEIDQCKNP EVLIGSIPVT LGHCSQLEGN  480
AVAFREDVVV ENLVKENSSQ DKPMKPDFDQ NGNNHPTLKF WRPLGRHDNK NPLAVNRGGP  540
EADAVYVNED SQNLSGPSSL RSCSIDGSDI CSENNSPHPE GRVEPGSLLL SSHAARDFLA  600
QRWKEALSLD HVKLVISPIS EPPRRQKTRD SKVVVGQYSD AVKSNVHANA ESRLPATSGV  660
TKSKPRAKPE KGTKTKYIPK QKTTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	283	ERKRHKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-117	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW06349